Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm7488-201ENSMUST00000117148 684 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm9136-201ENSMUST00000193368 454 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm2423-201ENSMUST00000074863 733 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 AC154176.2-201ENSMUST00000225376 6429 ntBASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smco3Q8BQM7 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Erich3-203ENSMUST00000189969 3460 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm12314-201ENSMUST00000118104 538 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm15920-201ENSMUST00000118998 402 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm22331-201ENSMUST00000158066 136 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Mir6977-201ENSMUST00000184960 64 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm29705-201ENSMUST00000212598 474 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm5356-201ENSMUST00000093326 615 ntBASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms