Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm23596-201ENSMUST00000104304 132 ntBASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm16505-201ENSMUST00000179981 232 ntBASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sfr1Q8BP27 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12□□□□□ -0.49
Sfr1Q8BP27 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Sfr1Q8BP27 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sfr1Q8BP27 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm12857-201ENSMUST00000117678 592 ntBASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm4909-201ENSMUST00000118749 794 ntBASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Gm3332-201ENSMUST00000189337 928 ntBASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sfr1Q8BP27 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms