Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm13135-201ENSMUST00000117628 3121 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 CT030166.5-201ENSMUST00000222249 420 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Gm22937-201ENSMUST00000103954 131 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Gm23745-201ENSMUST00000104230 125 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Gm9353-201ENSMUST00000200472 604 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 AC152169.1-201ENSMUST00000223901 701 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Rps3a2-201ENSMUST00000074245 792 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Rps3a3-201ENSMUST00000074680 795 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Gm25580-201ENSMUST00000083409 327 ntBASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col16a1Q8BLX7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Gm43167-201ENSMUST00000202001 1606 ntBASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Gm24279-201ENSMUST00000104236 131 ntBASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Gm13094-201ENSMUST00000117930 409 ntBASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Gm43002-201ENSMUST00000200310 155 ntBASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 n-R5s71-201ENSMUST00000093668 119 ntBASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col16a1Q8BLX7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Col16a1Q8BLX7 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col16a1Q8BLX7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col16a1Q8BLX7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col16a1Q8BLX7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms