Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf220Q6PDX6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm15806-201ENSMUST00000120696 955 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm12363-201ENSMUST00000122250 668 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm22331-201ENSMUST00000158066 136 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm27486-201ENSMUST00000184923 80 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf220Q6PDX6 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.08□□□□□ -0.63
Rnf220Q6PDX6 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm24231-201ENSMUST00000104315 133 ntBASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm24644-201ENSMUST00000157114 139 ntBASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms