Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Gm13297-201ENSMUST00000120205 934 ntBASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Gm8712-201ENSMUST00000221090 701 ntBASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Gm8420-201ENSMUST00000097103 598 ntBASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd3Q6P9Z1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm18054-201ENSMUST00000207539 555 ntBASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd3Q6P9Z1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm12015-201ENSMUST00000117065 843 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm15370-201ENSMUST00000117158 253 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm15547-201ENSMUST00000122152 333 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm27572-201ENSMUST00000183702 255 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms