Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm18123-201ENSMUST00000210874 822 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 AC134537.1-201ENSMUST00000219205 265 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 AC102847.1-202ENSMUST00000226313 1245 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm10580-201ENSMUST00000097985 396 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm10582-201ENSMUST00000097987 396 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm10583-201ENSMUST00000097988 396 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm25580-201ENSMUST00000083409 327 ntBASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slx4Q6P1D7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gm12337-201ENSMUST00000119634 400 ntBASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gm16305-201ENSMUST00000140747 556 ntBASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC17.73■□□□□ 0.43
Slx4Q6P1D7 AC137871.1-201ENSMUST00000228278 475 ntBASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slx4Q6P1D7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Gm5171-201ENSMUST00000214944 1415 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Gm37014-201ENSMUST00000194723 2253 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Gm11700-201ENSMUST00000119409 403 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Gm14052-201ENSMUST00000121434 1031 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Mir6953-201ENSMUST00000184745 68 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Ighv5-8-202ENSMUST00000191967 337 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 AC164556.1-201ENSMUST00000221318 751 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 CT025603.1-201ENSMUST00000224040 448 ntBASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms