Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm2383-201ENSMUST00000181461 807 ntBASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ParpbpQ6IRT3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ParpbpQ6IRT3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ParpbpQ6IRT3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
ParpbpQ6IRT3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
ParpbpQ6IRT3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ParpbpQ6IRT3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
ParpbpQ6IRT3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 AY036118-201ENSMUST00000200021 923 ntBASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.02□□□□□ -0.65
ParpbpQ6IRT3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms