Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Mir341-201ENSMUST00000093593 96 ntBASIC10.68□□□□□ -0.7
AtrxQ61687 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
AtrxQ61687 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
AtrxQ61687 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
AtrxQ61687 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.68□□□□□ -0.7
AtrxQ61687 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.68□□□□□ -0.7
AtrxQ61687 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.68□□□□□ -0.7
AtrxQ61687 Gm8268-201ENSMUST00000209683 458 ntBASIC10.68□□□□□ -0.7
AtrxQ61687 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.68□□□□□ -0.7
AtrxQ61687 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
AtrxQ61687 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
AtrxQ61687 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.68□□□□□ -0.7
AtrxQ61687 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
AtrxQ61687 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.68□□□□□ -0.7
AtrxQ61687 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.68□□□□□ -0.7
AtrxQ61687 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.68□□□□□ -0.7
AtrxQ61687 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
AtrxQ61687 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.68□□□□□ -0.7
AtrxQ61687 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Gm23439-201ENSMUST00000104292 132 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Gm17192-201ENSMUST00000169031 511 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Gm9487-201ENSMUST00000216600 472 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Gm5395-201ENSMUST00000121650 915 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Mir432-201ENSMUST00000157230 75 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Gm3150-201ENSMUST00000166418 204 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Zfp419-201ENSMUST00000173446 916 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.67□□□□□ -0.7
AtrxQ61687 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.67□□□□□ -0.7
AtrxQ61687 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.67□□□□□ -0.7
AtrxQ61687 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
AtrxQ61687 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms