Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sox17Q61473 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox17Q61473 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm25043-201ENSMUST00000158604 212 ntBASIC10.94□□□□□ -0.66
Sox17Q61473 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sox17Q61473 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm43818-201ENSMUST00000200605 466 ntBASIC10.94□□□□□ -0.66
Sox17Q61473 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.94□□□□□ -0.66
Sox17Q61473 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.94□□□□□ -0.66
Sox17Q61473 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.94□□□□□ -0.66
Sox17Q61473 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox17Q61473 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.94□□□□□ -0.66
Sox17Q61473 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox17Q61473 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Sox17Q61473 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 Gm24548-201ENSMUST00000158650 108 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm9192-201ENSMUST00000183221 985 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sox17Q61473 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox17Q61473 Gm40466-201ENSMUST00000212174 422 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox17Q61473 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Sox17Q61473 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.93□□□□□ -0.66
Sox17Q61473 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms