Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd8Q09XV5 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd8Q09XV5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd8Q09XV5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd8Q09XV5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd8Q09XV5 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd8Q09XV5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Paupar-201ENSMUST00000194826 3482 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm7790-201ENSMUST00000118716 1310 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm22900-201ENSMUST00000104538 130 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm6317-201ENSMUST00000183159 1000 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm37723-201ENSMUST00000194480 565 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm43761-201ENSMUST00000202132 991 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.44□□□□□ -0.74
Chd8Q09XV5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.44□□□□□ -0.74
Chd8Q09XV5 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm25694-201ENSMUST00000175448 282 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm37688-201ENSMUST00000195195 465 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm30946-201ENSMUST00000198288 724 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm7781-201ENSMUST00000117258 788 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm7445-201ENSMUST00000192115 340 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm38151-201ENSMUST00000195085 289 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm9369-201ENSMUST00000196009 733 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 AC155293.1-201ENSMUST00000219793 1026 ntBASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd8Q09XV5 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms