Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Snord55-201ENSMUST00000174939 79 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm11380-201ENSMUST00000118067 560 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm14176-201ENSMUST00000121302 477 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Gm5738-201ENSMUST00000206016 779 ntBASIC14.5□□□□□ -0.09
Cacna1sQ02789 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1sQ02789 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Acot6-202ENSMUST00000222921 3622 ntBASIC14.49□□□□□ -0.09
Cacna1sQ02789 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Gm11700-201ENSMUST00000119409 403 ntBASIC14.49□□□□□ -0.09
Cacna1sQ02789 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.49□□□□□ -0.09
Cacna1sQ02789 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Gm45258-201ENSMUST00000210042 853 ntBASIC14.49□□□□□ -0.09
Cacna1sQ02789 AC140314.1-201ENSMUST00000219549 554 ntBASIC14.49□□□□□ -0.09
Cacna1sQ02789 AC163638.2-201ENSMUST00000224920 827 ntBASIC14.49□□□□□ -0.09
Cacna1sQ02789 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacna1sQ02789 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms