Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim43bP86448 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim43bP86448 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.07□□□□□ -0.48
Trim43bP86448 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim43bP86448 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim43bP86448 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm12015-201ENSMUST00000117065 843 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim43bP86448 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm2383-201ENSMUST00000181461 807 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim43bP86448 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm44967-201ENSMUST00000207047 631 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim43bP86448 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim43bP86448 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim43bP86448 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.07□□□□□ -0.48
Trim43bP86448 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.06□□□□□ -0.48
Trim43bP86448 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trim43bP86448 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trim43bP86448 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.06□□□□□ -0.48
Trim43bP86448 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim43bP86448 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43bP86448 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.06□□□□□ -0.48
Trim43bP86448 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
Trim43bP86448 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.06□□□□□ -0.48
Trim43bP86448 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms