Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Matn2-203ENSMUST00000226766 3252 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.69□□□□□ -0.38
CiitaP79621 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.69□□□□□ -0.38
CiitaP79621 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.69□□□□□ -0.38
CiitaP79621 Gm43852-201ENSMUST00000202098 917 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Gm8574-201ENSMUST00000203207 924 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.69□□□□□ -0.38
CiitaP79621 Gm18065-201ENSMUST00000221395 526 ntBASIC12.69□□□□□ -0.38
CiitaP79621 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CiitaP79621 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.69□□□□□ -0.38
CiitaP79621 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.69□□□□□ -0.38
CiitaP79621 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CiitaP79621 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CiitaP79621 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.68□□□□□ -0.38
CiitaP79621 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CiitaP79621 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Gm23771-201ENSMUST00000178702 110 ntBASIC12.68□□□□□ -0.38
CiitaP79621 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.68□□□□□ -0.38
CiitaP79621 Gm43520-201ENSMUST00000197996 164 ntBASIC12.68□□□□□ -0.38
CiitaP79621 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CiitaP79621 Gm8342-201ENSMUST00000209839 757 ntBASIC12.68□□□□□ -0.38
CiitaP79621 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.68□□□□□ -0.38
CiitaP79621 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.68□□□□□ -0.38
CiitaP79621 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.68□□□□□ -0.38
CiitaP79621 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.68□□□□□ -0.38
CiitaP79621 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.68□□□□□ -0.38
CiitaP79621 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.68□□□□□ -0.38
CiitaP79621 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CiitaP79621 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.67□□□□□ -0.38
CiitaP79621 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.67□□□□□ -0.38
CiitaP79621 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CiitaP79621 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Gm11246-201ENSMUST00000120880 345 ntBASIC12.67□□□□□ -0.38
CiitaP79621 Gm11244-201ENSMUST00000121243 237 ntBASIC12.67□□□□□ -0.38
CiitaP79621 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.67□□□□□ -0.38
CiitaP79621 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.67□□□□□ -0.38
CiitaP79621 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.67□□□□□ -0.38
CiitaP79621 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.67□□□□□ -0.38
CiitaP79621 Gm20495-201ENSMUST00000173902 235 ntBASIC12.67□□□□□ -0.38
CiitaP79621 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms