Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stra8P70278 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC16.16■□□□□ 0.18
Stra8P70278 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.16■□□□□ 0.18
Stra8P70278 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Stra8P70278 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm37931-201ENSMUST00000194686 2866 ntBASIC16.16■□□□□ 0.18
Stra8P70278 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm14381-201ENSMUST00000122105 414 ntBASIC16.16■□□□□ 0.18
Stra8P70278 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm7584-201ENSMUST00000175829 940 ntBASIC16.16■□□□□ 0.18
Stra8P70278 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Stra8P70278 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm7783-201ENSMUST00000204795 781 ntBASIC16.16■□□□□ 0.18
Stra8P70278 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.16■□□□□ 0.18
Stra8P70278 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Stra8P70278 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Stra8P70278 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stra8P70278 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Stra8P70278 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Gm24255-201ENSMUST00000104481 128 ntBASIC16.15■□□□□ 0.18
Stra8P70278 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Stra8P70278 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Stra8P70278 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Stra8P70278 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Gm11700-201ENSMUST00000119409 403 ntBASIC16.15■□□□□ 0.18
Stra8P70278 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.15■□□□□ 0.18
Stra8P70278 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.15■□□□□ 0.18
Stra8P70278 Mir6420-201ENSMUST00000185032 102 ntBASIC16.15■□□□□ 0.18
Stra8P70278 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Gm17931-201ENSMUST00000208132 634 ntBASIC16.15■□□□□ 0.18
Stra8P70278 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Stra8P70278 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stra8P70278 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Stra8P70278 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC16.14■□□□□ 0.17
Stra8P70278 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Stra8P70278 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.14■□□□□ 0.17
Stra8P70278 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Gm13350-201ENSMUST00000120519 479 ntBASIC16.14■□□□□ 0.17
Stra8P70278 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.14■□□□□ 0.17
Stra8P70278 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Gm807-202ENSMUST00000224929 408 ntBASIC16.14■□□□□ 0.17
Stra8P70278 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Gm7642-201ENSMUST00000216345 1809 ntBASIC16.14■□□□□ 0.17
Stra8P70278 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC16.14■□□□□ 0.17
Stra8P70278 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Stra8P70278 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stra8P70278 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms