Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hmga1P17095 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.92□□□□□ -0.5
Hmga1P17095 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hmga1P17095 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.92□□□□□ -0.5
Hmga1P17095 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmga1P17095 Gm25492-201ENSMUST00000157383 129 ntBASIC11.92□□□□□ -0.5
Hmga1P17095 Gm8194-201ENSMUST00000159783 859 ntBASIC11.92□□□□□ -0.5
Hmga1P17095 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Hmga1P17095 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmga1P17095 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.92□□□□□ -0.5
Hmga1P17095 Gm38210-201ENSMUST00000191944 809 ntBASIC11.92□□□□□ -0.5
Hmga1P17095 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.92□□□□□ -0.5
Hmga1P17095 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmga1P17095 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Hmga1P17095 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hmga1P17095 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hmga1P17095 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Hmga1P17095 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmga1P17095 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hmga1P17095 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmga1P17095 Gm25766-201ENSMUST00000104101 131 ntBASIC11.91□□□□□ -0.5
Hmga1P17095 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmga1P17095 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.91□□□□□ -0.5
Hmga1P17095 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.91□□□□□ -0.5
Hmga1P17095 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Hmga1P17095 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.91□□□□□ -0.5
Hmga1P17095 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.91□□□□□ -0.5
Hmga1P17095 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Hmga1P17095 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmga1P17095 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmga1P17095 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.91□□□□□ -0.5
Hmga1P17095 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmga1P17095 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.9□□□□□ -0.5
Hmga1P17095 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.9□□□□□ -0.5
Hmga1P17095 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Hmga1P17095 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Gm24398-201ENSMUST00000157870 109 ntBASIC11.9□□□□□ -0.5
Hmga1P17095 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Gm42518-201ENSMUST00000196277 938 ntBASIC11.9□□□□□ -0.5
Hmga1P17095 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.9□□□□□ -0.5
Hmga1P17095 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Gm45594-201ENSMUST00000211717 241 ntBASIC11.9□□□□□ -0.5
Hmga1P17095 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.9□□□□□ -0.5
Hmga1P17095 Gm5468-202ENSMUST00000227851 682 ntBASIC11.9□□□□□ -0.5
Hmga1P17095 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmga1P17095 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms