Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RaraP11416 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
RaraP11416 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RaraP11416 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
RaraP11416 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
RaraP11416 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RaraP11416 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RaraP11416 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RaraP11416 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.64□□□□□ -0.39
RaraP11416 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.64□□□□□ -0.39
RaraP11416 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.64□□□□□ -0.39
RaraP11416 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RaraP11416 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RaraP11416 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.64□□□□□ -0.39
RaraP11416 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.64□□□□□ -0.39
RaraP11416 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.64□□□□□ -0.39
RaraP11416 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.64□□□□□ -0.39
RaraP11416 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RaraP11416 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Gm5705-201ENSMUST00000066241 711 ntBASIC12.64□□□□□ -0.39
RaraP11416 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.64□□□□□ -0.39
RaraP11416 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.64□□□□□ -0.39
RaraP11416 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RaraP11416 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RaraP11416 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RaraP11416 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RaraP11416 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.64□□□□□ -0.39
RaraP11416 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RaraP11416 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.63□□□□□ -0.39
RaraP11416 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Gm11660-201ENSMUST00000120955 412 ntBASIC12.63□□□□□ -0.39
RaraP11416 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.63□□□□□ -0.39
RaraP11416 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
RaraP11416 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RaraP11416 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RaraP11416 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.62□□□□□ -0.39
RaraP11416 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms