Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Gm15197-201ENSMUST00000120526 478 ntBASIC15.09■□□□□ 0.01
Hoxc9P09633 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hoxc9P09633 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Gm30946-201ENSMUST00000198288 724 ntBASIC15.09■□□□□ 0.01
Hoxc9P09633 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.09■□□□□ 0.01
Hoxc9P09633 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC15.09■□□□□ 0.01
Hoxc9P09633 AC154305.2-201ENSMUST00000225813 901 ntBASIC15.09■□□□□ 0.01
Hoxc9P09633 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.09■□□□□ 0.01
Hoxc9P09633 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxc9P09633 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hoxc9P09633 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hoxc9P09633 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hoxc9P09633 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.08■□□□□ 0.01
Hoxc9P09633 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.08■□□□□ 0
Hoxc9P09633 Gm13047-201ENSMUST00000117116 815 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Gm22146-201ENSMUST00000157397 288 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Gm16030-201ENSMUST00000159098 603 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Gm4862-201ENSMUST00000170405 438 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Gm20392-201ENSMUST00000173047 701 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Gm18201-201ENSMUST00000174735 875 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC15.08■□□□□ 0
Hoxc9P09633 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.08■□□□□ 0
Hoxc9P09633 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Hoxc9P09633 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hoxc9P09633 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.08■□□□□ 0
Hoxc9P09633 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.08■□□□□ 0
Hoxc9P09633 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxc9P09633 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Cog3-203ENSMUST00000227473 4197 ntBASIC15.07■□□□□ 0
Hoxc9P09633 Gm13445-201ENSMUST00000121664 307 ntBASIC15.07■□□□□ 0
Hoxc9P09633 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.07■□□□□ 0
Hoxc9P09633 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC15.07■□□□□ 0
Hoxc9P09633 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.07■□□□□ 0
Hoxc9P09633 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.07■□□□□ 0
Hoxc9P09633 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.07■□□□□ 0
Hoxc9P09633 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.07■□□□□ 0
Hoxc9P09633 Gm7525-201ENSMUST00000219425 454 ntBASIC15.07■□□□□ 0
Hoxc9P09633 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Hoxc9P09633 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Hoxc9P09633 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.07■□□□□ 0
Hoxc9P09633 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc9P09633 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.06■□□□□ 0
Hoxc9P09633 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.06■□□□□ 0
Hoxc9P09633 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Hoxc9P09633 Gm14497-201ENSMUST00000119537 580 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms