Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NclP09405 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NclP09405 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NclP09405 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC17.39■□□□□ 0.37
NclP09405 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC17.39■□□□□ 0.37
NclP09405 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NclP09405 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
NclP09405 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC17.38■□□□□ 0.37
NclP09405 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Gm22138-201ENSMUST00000158748 128 ntBASIC17.38■□□□□ 0.37
NclP09405 Gm5982-201ENSMUST00000196234 512 ntBASIC17.38■□□□□ 0.37
NclP09405 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NclP09405 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
NclP09405 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.38■□□□□ 0.37
NclP09405 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC17.38■□□□□ 0.37
NclP09405 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NclP09405 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NclP09405 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NclP09405 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NclP09405 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC17.37■□□□□ 0.37
NclP09405 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NclP09405 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
NclP09405 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NclP09405 Gm11892-201ENSMUST00000117711 1202 ntBASIC17.37■□□□□ 0.37
NclP09405 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC17.37■□□□□ 0.37
NclP09405 Mir8093-201ENSMUST00000185043 137 ntBASIC17.37■□□□□ 0.37
NclP09405 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.37■□□□□ 0.37
NclP09405 Gm3551-201ENSMUST00000190750 664 ntBASIC17.37■□□□□ 0.37
NclP09405 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC17.37■□□□□ 0.37
NclP09405 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NclP09405 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NclP09405 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.36■□□□□ 0.37
NclP09405 Gm12516-201ENSMUST00000120819 385 ntBASIC17.36■□□□□ 0.37
NclP09405 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 AC169511.2-201ENSMUST00000226674 2063 ntBASIC17.36■□□□□ 0.37
NclP09405 AC157950.1-201ENSMUST00000217561 2168 ntBASIC17.36■□□□□ 0.37
NclP09405 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC17.36■□□□□ 0.37
NclP09405 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NclP09405 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NclP09405 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC17.36■□□□□ 0.37
NclP09405 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
NclP09405 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NclP09405 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms