Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.75□□□□□ -0.69
P01852 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
P01852 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P01852 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.74□□□□□ -0.69
P01852 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
P01852 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.74□□□□□ -0.69
P01852 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Gm11450-201ENSMUST00000121144 333 ntBASIC10.74□□□□□ -0.69
P01852 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.74□□□□□ -0.69
P01852 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
P01852 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.74□□□□□ -0.69
P01852 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
P01852 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.74□□□□□ -0.69
P01852 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Gm4482-201ENSMUST00000200876 742 ntBASIC10.74□□□□□ -0.69
P01852 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
P01852 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.74□□□□□ -0.69
P01852 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01852 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
P01852 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.73□□□□□ -0.69
P01852 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.73□□□□□ -0.69
P01852 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.73□□□□□ -0.69
P01852 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.73□□□□□ -0.69
P01852 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.73□□□□□ -0.69
P01852 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
P01852 Gm13035-201ENSMUST00000117496 342 ntBASIC10.73□□□□□ -0.69
P01852 Gm15515-201ENSMUST00000117827 822 ntBASIC10.73□□□□□ -0.69
P01852 Gm8566-201ENSMUST00000120174 465 ntBASIC10.73□□□□□ -0.69
P01852 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.73□□□□□ -0.69
P01852 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.73□□□□□ -0.69
P01852 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.73□□□□□ -0.69
P01852 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.73□□□□□ -0.69
P01852 Gm8100-201ENSMUST00000182906 988 ntBASIC10.73□□□□□ -0.69
P01852 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.73□□□□□ -0.69
P01852 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.73□□□□□ -0.69
P01852 Gm7848-201ENSMUST00000210739 718 ntBASIC10.73□□□□□ -0.69
P01852 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
P01852 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
P01852 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P01852 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01852 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.73□□□□□ -0.69
P01852 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.73□□□□□ -0.69
P01852 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms