Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm22379-201ENSMUST00000157480 131 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm4604-201ENSMUST00000025040 390 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.88□□□□□ -0.35
Trdmt1O55055 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.88□□□□□ -0.35
Trdmt1O55055 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trdmt1O55055 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trdmt1O55055 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm15374-201ENSMUST00000119313 844 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm12791-201ENSMUST00000120788 655 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm24248-201ENSMUST00000157321 322 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.87□□□□□ -0.35
Trdmt1O55055 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.87□□□□□ -0.35
Trdmt1O55055 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trdmt1O55055 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms