Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Mir7023-201ENSMUST00000185093 64 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm37935-201ENSMUST00000192012 982 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm42937-201ENSMUST00000197360 752 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm6439-201ENSMUST00000199849 862 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Gm45668-201ENSMUST00000211271 493 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Gm29705-201ENSMUST00000212598 474 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Lect2-202ENSMUST00000225183 823 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Gm10012-201ENSMUST00000078252 192 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.88□□□□□ -0.83
Prrt1O35449 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Prrt1O35449 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Prrt1O35449 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Prrt1O35449 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Prrt1O35449 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Prrt1O35449 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.87□□□□□ -0.83
Prrt1O35449 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Prrt1O35449 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.87□□□□□ -0.83
Prrt1O35449 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Prrt1O35449 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Prrt1O35449 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Prrt1O35449 Gm12859-201ENSMUST00000117834 427 ntBASIC9.87□□□□□ -0.83
Prrt1O35449 Gm14999-201ENSMUST00000121039 624 ntBASIC9.87□□□□□ -0.83
Prrt1O35449 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Prrt1O35449 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Gm18584-201ENSMUST00000203098 964 ntBASIC9.87□□□□□ -0.83
Prrt1O35449 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Prrt1O35449 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.87□□□□□ -0.83
Prrt1O35449 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.87□□□□□ -0.83
Prrt1O35449 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Prrt1O35449 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Prrt1O35449 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms