Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm2553-201ENSMUST00000215986 605 ntBASIC12.04□□□□□ -0.48
Atf6F6VAN0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm9797-202ENSMUST00000218003 294 ntBASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.03□□□□□ -0.48
Atf6F6VAN0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.03□□□□□ -0.48
Atf6F6VAN0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gm8343-201ENSMUST00000182705 994 ntBASIC12.03□□□□□ -0.48
Atf6F6VAN0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atf6F6VAN0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Atf6F6VAN0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atf6F6VAN0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atf6F6VAN0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.02□□□□□ -0.49
Atf6F6VAN0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm15711-201ENSMUST00000118889 535 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Gm12380-201ENSMUST00000119012 544 ntBASIC12.02□□□□□ -0.49
Atf6F6VAN0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms