Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm11619-201ENSMUST00000117474 237 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm43852-201ENSMUST00000202098 917 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm6855-201ENSMUST00000206307 790 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm45113-201ENSMUST00000207518 165 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Paupar-201ENSMUST00000194826 3482 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.51□□□□□ -0.73
Shank1D3YZU1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shank1D3YZU1 Gm22594-201ENSMUST00000104251 130 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm5870-201ENSMUST00000196461 282 ntBASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms