Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm5616-201ENSMUST00000165252 384 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm8741-201ENSMUST00000174736 384 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm4607-201ENSMUST00000206649 577 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm17931-201ENSMUST00000208132 634 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf40aQ9R1C7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm13333-201ENSMUST00000119424 781 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm14017-201ENSMUST00000121934 386 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm18893-201ENSMUST00000198416 943 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm44262-201ENSMUST00000204969 372 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.96□□□□□ -0.33
Prpf40aQ9R1C7 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.96□□□□□ -0.34
Prpf40aQ9R1C7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf40aQ9R1C7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf40aQ9R1C7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Prpf40aQ9R1C7 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.96□□□□□ -0.34
Prpf40aQ9R1C7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.96□□□□□ -0.34
Prpf40aQ9R1C7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Gm26286-201ENSMUST00000104166 134 ntBASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms