Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm6114-201ENSMUST00000182472 968 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Mir6407-201ENSMUST00000184510 101 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.25□□□□□ -0.61
SrfQ9JM73 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.25□□□□□ -0.61
SrfQ9JM73 AC153544.1-201ENSMUST00000217988 400 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm43216-201ENSMUST00000196295 1333 ntBASIC11.25□□□□□ -0.61
SrfQ9JM73 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SrfQ9JM73 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SrfQ9JM73 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm11801-201ENSMUST00000117807 746 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm12036-201ENSMUST00000120008 530 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm10169-201ENSMUST00000121822 348 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.24□□□□□ -0.61
SrfQ9JM73 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm42433-201ENSMUST00000196806 940 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms