Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm13665-201ENSMUST00000120830 528 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm26361-201ENSMUST00000158868 186 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm28686-201ENSMUST00000187404 609 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm5982-201ENSMUST00000196234 512 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.19□□□□□ -0.46
Cpne8Q9DC53 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm15711-201ENSMUST00000118889 535 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm14208-201ENSMUST00000119645 678 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Mir1938-201ENSMUST00000158746 100 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm27320-201ENSMUST00000184892 109 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 AY036118-201ENSMUST00000200021 923 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm6450-201ENSMUST00000200896 574 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpne8Q9DC53 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Gm11660-201ENSMUST00000120955 412 ntBASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.17□□□□□ -0.46
Cpne8Q9DC53 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms