Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm5298-201ENSMUST00000201122 892 ntBASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm8894-201ENSMUST00000074642 666 ntBASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Prpf8Q99PV0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm11956-201ENSMUST00000119525 512 ntBASIC9.65□□□□□ -0.87
Prpf8Q99PV0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm4862-201ENSMUST00000170405 438 ntBASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm44158-201ENSMUST00000203881 505 ntBASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Prpf8Q99PV0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm26013-201ENSMUST00000104404 119 ntBASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm16071-201ENSMUST00000119589 793 ntBASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm17826-201ENSMUST00000189720 798 ntBASIC9.64□□□□□ -0.87
Prpf8Q99PV0 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm6450-201ENSMUST00000200896 574 ntBASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm6722-201ENSMUST00000221586 390 ntBASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Prpf8Q99PV0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms