Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Gm4310-201ENSMUST00000177847 889 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Gm6450-201ENSMUST00000200896 574 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Gm807-202ENSMUST00000224929 408 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Tlr3Q99MB1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm23596-201ENSMUST00000104304 132 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Mir7032-201ENSMUST00000185154 79 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm3332-201ENSMUST00000189337 928 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm38117-201ENSMUST00000194653 939 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.61□□□□□ -0.39
Tlr3Q99MB1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms