Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm26670-202ENSMUST00000226862 340 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RtcbQ99LF4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RtcbQ99LF4 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.46□□□□□ -0.1
RtcbQ99LF4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RtcbQ99LF4 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RtcbQ99LF4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RtcbQ99LF4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RtcbQ99LF4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Gm14234-201ENSMUST00000119539 845 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Gm25677-201ENSMUST00000174983 72 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 Gm37365-201ENSMUST00000193109 409 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 Gm43752-201ENSMUST00000198475 697 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Gm8181-201ENSMUST00000062242 669 ntBASIC14.45□□□□□ -0.1
RtcbQ99LF4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RtcbQ99LF4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.44□□□□□ -0.1
RtcbQ99LF4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm15197-201ENSMUST00000120526 478 ntBASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm5340-201ENSMUST00000203733 880 ntBASIC14.44□□□□□ -0.1
RtcbQ99LF4 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.44□□□□□ -0.1
RtcbQ99LF4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RtcbQ99LF4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms