Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ebf4Q8K4J2 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ebf4Q8K4J2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ebf4Q8K4J2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.64□□□□□ -0.71
Ebf4Q8K4J2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms