Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.77□□□□□ -0.37
Depdc1bQ8BH88 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm5616-201ENSMUST00000165252 384 ntBASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm8741-201ENSMUST00000174736 384 ntBASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Depdc1bQ8BH88 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm14441-201ENSMUST00000121960 540 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm18734-201ENSMUST00000172937 808 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 AU022133-201ENSMUST00000200601 873 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gm43947-201ENSMUST00000203019 959 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Depdc1bQ8BH88 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.74□□□□□ -0.37
Depdc1bQ8BH88 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.74□□□□□ -0.37
Depdc1bQ8BH88 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Depdc1bQ8BH88 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms