Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim62Q80V85 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Ginm1-202ENSMUST00000065124 300 ntBASIC12.14□□□□□ -0.47
Trim62Q80V85 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trim62Q80V85 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim62Q80V85 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim62Q80V85 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim62Q80V85 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trim62Q80V85 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim62Q80V85 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim62Q80V85 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm12579-201ENSMUST00000118040 783 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm4978-201ENSMUST00000071565 801 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.13□□□□□ -0.47
Trim62Q80V85 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trim62Q80V85 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim62Q80V85 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm12165-201ENSMUST00000117047 342 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm8731-201ENSMUST00000118088 412 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm13045-201ENSMUST00000119019 712 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm3150-201ENSMUST00000166418 204 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm12407-201ENSMUST00000180219 324 ntBASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim62Q80V85 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms