Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm4726-201ENSMUST00000135604 736 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm6019-201ENSMUST00000148369 736 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gm29787-201ENSMUST00000222129 849 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh19Q80TF3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm14193-201ENSMUST00000105067 153 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm12029-201ENSMUST00000120073 832 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm8737-201ENSMUST00000122208 642 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm17391-201ENSMUST00000171036 126 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm9540-201ENSMUST00000188230 478 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm43852-201ENSMUST00000202098 917 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm5051-201ENSMUST00000204085 485 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm7940-201ENSMUST00000218195 769 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms