Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rc3h1Q4VGL6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm25076-201ENSMUST00000104098 132 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm11246-201ENSMUST00000120880 345 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm21092-201ENSMUST00000178995 955 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Olfr584-201ENSMUST00000098210 964 ntBASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.59□□□□□ -0.23
Rc3h1Q4VGL6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rc3h1Q4VGL6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rc3h1Q4VGL6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rc3h1Q4VGL6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rc3h1Q4VGL6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rc3h1Q4VGL6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm14665-201ENSMUST00000122294 557 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm10807-201ENSMUST00000177134 795 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm37436-201ENSMUST00000193842 1085 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm38314-201ENSMUST00000195709 625 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm8574-201ENSMUST00000203207 924 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gm6108-201ENSMUST00000208365 367 ntBASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms