Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx49Q4FZF3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm15610-201ENSMUST00000120584 195 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm26134-201ENSMUST00000178484 110 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm6108-201ENSMUST00000208365 367 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Mt1-202ENSMUST00000211807 1085 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm5451-201ENSMUST00000080545 579 ntBASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx49Q4FZF3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm12783-201ENSMUST00000121425 397 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm5257-201ENSMUST00000121823 790 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm9135-201ENSMUST00000182963 990 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm19640-201ENSMUST00000214849 464 ntBASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx49Q4FZF3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms