Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cxcr4P70658 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcr4P70658 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm2260-201ENSMUST00000184965 657 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcr4P70658 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.01□□□□□ -0.65
Cxcr4P70658 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcr4P70658 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Cxcr4P70658 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Gm13996-201ENSMUST00000118456 430 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Gm14277-201ENSMUST00000121195 360 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11□□□□□ -0.65
Cxcr4P70658 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 Gm44262-201ENSMUST00000204969 372 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Gm45186-201ENSMUST00000206874 478 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 AC154252.2-201ENSMUST00000223593 767 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Cxcr4P70658 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcr4P70658 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11□□□□□ -0.65
Cxcr4P70658 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11□□□□□ -0.65
Cxcr4P70658 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.99□□□□□ -0.65
Cxcr4P70658 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcr4P70658 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcr4P70658 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcr4P70658 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcr4P70658 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcr4P70658 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcr4P70658 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcr4P70658 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms