Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.74□□□□□ -0.53
Fdft1P53798 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.74□□□□□ -0.53
Fdft1P53798 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.73□□□□□ -0.53
Fdft1P53798 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fdft1P53798 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Fdft1P53798 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.73□□□□□ -0.53
Fdft1P53798 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Fdft1P53798 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm15276-201ENSMUST00000145953 498 ntBASIC11.73□□□□□ -0.53
Fdft1P53798 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Fdft1P53798 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm27320-201ENSMUST00000184892 109 ntBASIC11.73□□□□□ -0.53
Fdft1P53798 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.73□□□□□ -0.53
Fdft1P53798 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.73□□□□□ -0.53
Fdft1P53798 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fdft1P53798 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.73□□□□□ -0.53
Fdft1P53798 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.73□□□□□ -0.53
Fdft1P53798 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Fdft1P53798 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Fdft1P53798 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fdft1P53798 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fdft1P53798 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.72□□□□□ -0.53
Fdft1P53798 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.72□□□□□ -0.53
Fdft1P53798 Gm38241-201ENSMUST00000192641 898 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 AA914427-201ENSMUST00000193194 1166 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Gm4607-201ENSMUST00000206649 577 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Gm13097-201ENSMUST00000210722 397 ntBASIC11.72□□□□□ -0.53
Fdft1P53798 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.72□□□□□ -0.53
Fdft1P53798 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.72□□□□□ -0.53
Fdft1P53798 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fdft1P53798 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.72□□□□□ -0.53
Fdft1P53798 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms