Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Gm11989-201ENSMUST00000117240 672 ntBASIC12.03□□□□□ -0.48
ClgnP52194 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Gm11362-201ENSMUST00000118838 850 ntBASIC12.03□□□□□ -0.48
ClgnP52194 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ClgnP52194 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.03□□□□□ -0.48
ClgnP52194 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ClgnP52194 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClgnP52194 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.03□□□□□ -0.48
ClgnP52194 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ClgnP52194 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClgnP52194 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
ClgnP52194 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClgnP52194 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.02□□□□□ -0.48
ClgnP52194 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ClgnP52194 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
ClgnP52194 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClgnP52194 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ClgnP52194 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ClgnP52194 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
ClgnP52194 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Gm22323-201ENSMUST00000103832 109 ntBASIC12.02□□□□□ -0.49
ClgnP52194 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.02□□□□□ -0.49
ClgnP52194 Gm38317-201ENSMUST00000195564 343 ntBASIC12.02□□□□□ -0.49
ClgnP52194 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.02□□□□□ -0.49
ClgnP52194 Gm44651-201ENSMUST00000207343 372 ntBASIC12.02□□□□□ -0.49
ClgnP52194 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.02□□□□□ -0.49
ClgnP52194 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.02□□□□□ -0.49
ClgnP52194 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ClgnP52194 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.02□□□□□ -0.49
ClgnP52194 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClgnP52194 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClgnP52194 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClgnP52194 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClgnP52194 Gm11511-201ENSMUST00000118146 540 ntBASIC12.01□□□□□ -0.49
ClgnP52194 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms