Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.87□□□□□ -0.51
Lhx3P50481 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Lhx3P50481 Pck2-205ENSMUST00000226352 2784 ntBASIC11.87□□□□□ -0.51
Lhx3P50481 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lhx3P50481 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.87□□□□□ -0.51
Lhx3P50481 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lhx3P50481 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lhx3P50481 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx3P50481 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Lhx3P50481 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.86□□□□□ -0.51
Lhx3P50481 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lhx3P50481 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.86□□□□□ -0.51
Lhx3P50481 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Lhx3P50481 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.86□□□□□ -0.51
Lhx3P50481 Gm2517-201ENSMUST00000215651 348 ntBASIC11.86□□□□□ -0.51
Lhx3P50481 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.86□□□□□ -0.51
Lhx3P50481 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lhx3P50481 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.86□□□□□ -0.51
Lhx3P50481 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lhx3P50481 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lhx3P50481 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lhx3P50481 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lhx3P50481 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.85□□□□□ -0.51
Lhx3P50481 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lhx3P50481 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Lhx3P50481 Mir1943-201ENSMUST00000158276 73 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.85□□□□□ -0.51
Lhx3P50481 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.85□□□□□ -0.51
Lhx3P50481 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.85□□□□□ -0.51
Lhx3P50481 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Gm43002-201ENSMUST00000200310 155 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 Gm7504-201ENSMUST00000201449 424 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.85□□□□□ -0.51
Lhx3P50481 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lhx3P50481 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.85□□□□□ -0.51
Lhx3P50481 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Lhx3P50481 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.85□□□□□ -0.51
Lhx3P50481 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lhx3P50481 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.85□□□□□ -0.51
Lhx3P50481 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lhx3P50481 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms