Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gm5745-201ENSMUST00000183748 313 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gm6266-201ENSMUST00000203844 806 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nkx2-1P50220 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.71□□□□□ -0.86
Nkx2-1P50220 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm14247-201ENSMUST00000120950 237 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm16379-201ENSMUST00000161469 348 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm45784-201ENSMUST00000188360 142 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm8762-201ENSMUST00000193486 339 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm18187-201ENSMUST00000196476 984 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm18584-201ENSMUST00000203098 964 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.7□□□□□ -0.86
Nkx2-1P50220 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms