Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.26□□□□□ -0.61
Cdh4P39038 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdh4P39038 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Cdh4P39038 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cdh4P39038 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Gm23085-201ENSMUST00000157849 293 ntBASIC11.26□□□□□ -0.61
Cdh4P39038 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdh4P39038 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdh4P39038 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Gm4482-201ENSMUST00000200876 742 ntBASIC11.26□□□□□ -0.61
Cdh4P39038 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cdh4P39038 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Cdh4P39038 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Gm10288-201ENSMUST00000084614 537 ntBASIC11.26□□□□□ -0.61
Cdh4P39038 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cdh4P39038 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Cdh4P39038 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm24891-201ENSMUST00000104391 136 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.25□□□□□ -0.61
Cdh4P39038 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Gm9192-201ENSMUST00000183221 985 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Mir7070-201ENSMUST00000183657 86 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm35960-201ENSMUST00000202712 767 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Gm7848-201ENSMUST00000210739 718 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdh4P39038 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.25□□□□□ -0.61
Cdh4P39038 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdh4P39038 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Cdh4P39038 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdh4P39038 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh4P39038 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh4P39038 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms