Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.36□□□□□ -0.43
Rfc1P35601 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rfc1P35601 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.36□□□□□ -0.43
Rfc1P35601 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfc1P35601 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Rfc1P35601 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm13492-201ENSMUST00000119772 665 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Gm13315-201ENSMUST00000120376 991 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Gm9083-201ENSMUST00000120423 819 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.35□□□□□ -0.43
Rfc1P35601 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rfc1P35601 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm6266-201ENSMUST00000203844 806 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Gm40466-201ENSMUST00000212174 422 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rfc1P35601 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.35□□□□□ -0.43
Rfc1P35601 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfc1P35601 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rfc1P35601 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.35□□□□□ -0.43
Rfc1P35601 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfc1P35601 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfc1P35601 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.34□□□□□ -0.43
Rfc1P35601 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rfc1P35601 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Rfc1P35601 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfc1P35601 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.34□□□□□ -0.43
Rfc1P35601 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rfc1P35601 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.34□□□□□ -0.43
Rfc1P35601 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.34□□□□□ -0.43
Rfc1P35601 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.34□□□□□ -0.43
Rfc1P35601 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfc1P35601 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms