Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.42□□□□□ -0.58
Hoxc11P31313 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.42□□□□□ -0.58
Hoxc11P31313 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Gm10179-201ENSMUST00000086233 688 ntBASIC11.42□□□□□ -0.58
Hoxc11P31313 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc11P31313 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc11P31313 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hoxc11P31313 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc11P31313 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc11P31313 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Hoxc11P31313 BC043934-202ENSMUST00000185694 2356 ntBASIC11.41□□□□□ -0.58
Hoxc11P31313 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxc11P31313 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gm11663-201ENSMUST00000117888 290 ntBASIC11.41□□□□□ -0.58
Hoxc11P31313 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gm13461-201ENSMUST00000120980 662 ntBASIC11.41□□□□□ -0.58
Hoxc11P31313 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gm27390-201ENSMUST00000184516 176 ntBASIC11.41□□□□□ -0.58
Hoxc11P31313 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Gm35960-201ENSMUST00000202712 767 ntBASIC11.41□□□□□ -0.58
Hoxc11P31313 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.41□□□□□ -0.58
Hoxc11P31313 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.41□□□□□ -0.58
Hoxc11P31313 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc11P31313 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc11P31313 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxc11P31313 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm27530-201ENSMUST00000184096 98 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Mir7686-201ENSMUST00000200604 57 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm9797-202ENSMUST00000218003 294 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.4□□□□□ -0.58
Hoxc11P31313 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hoxc11P31313 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc11P31313 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms