Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm8018-201ENSMUST00000173536 789 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nedd8P29595 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Gm42612-201ENSMUST00000197986 623 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Gm43170-201ENSMUST00000199827 612 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.78□□□□□ -0.68
Nedd8P29595 Gm17931-201ENSMUST00000208132 634 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Lect2-202ENSMUST00000225183 823 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.78□□□□□ -0.68
Nedd8P29595 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
Nedd8P29595 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.78□□□□□ -0.68
Nedd8P29595 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nedd8P29595 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nedd8P29595 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.78□□□□□ -0.68
Nedd8P29595 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nedd8P29595 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.77□□□□□ -0.68
Nedd8P29595 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Nedd8P29595 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.77□□□□□ -0.68
Nedd8P29595 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.77□□□□□ -0.68
Nedd8P29595 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nedd8P29595 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Gm12314-201ENSMUST00000118104 538 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.77□□□□□ -0.69
Nedd8P29595 Gm27989-201ENSMUST00000184721 107 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.77□□□□□ -0.69
Nedd8P29595 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nedd8P29595 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.77□□□□□ -0.69
Nedd8P29595 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nedd8P29595 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nedd8P29595 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.76□□□□□ -0.69
Nedd8P29595 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nedd8P29595 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms