Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.88□□□□□ -0.35
Pde6bP23440 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pde6bP23440 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pde6bP23440 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm11628-201ENSMUST00000117568 171 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm20614-201ENSMUST00000177106 632 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm43058-201ENSMUST00000197645 625 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.87□□□□□ -0.35
Pde6bP23440 Gm2517-201ENSMUST00000215651 348 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 Gm10752-201ENSMUST00000218348 729 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.87□□□□□ -0.35
Pde6bP23440 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Pde6bP23440 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.87□□□□□ -0.35
Pde6bP23440 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pde6bP23440 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pde6bP23440 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pde6bP23440 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Pde6bP23440 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pde6bP23440 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm14193-201ENSMUST00000105067 153 ntBASIC12.86□□□□□ -0.35
Pde6bP23440 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm15352-201ENSMUST00000118696 270 ntBASIC12.86□□□□□ -0.35
Pde6bP23440 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pde6bP23440 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pde6bP23440 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.86□□□□□ -0.35
Pde6bP23440 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Pde6bP23440 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pde6bP23440 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms