Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.52□□□□□ -0.89
Cdx1P18111 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm4857-201ENSMUST00000192718 785 ntBASIC9.52□□□□□ -0.89
Cdx1P18111 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.52□□□□□ -0.89
Cdx1P18111 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.52□□□□□ -0.89
Cdx1P18111 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.52□□□□□ -0.89
Cdx1P18111 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Cdx1P18111 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Cdx1P18111 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.52□□□□□ -0.89
Cdx1P18111 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.52□□□□□ -0.89
Cdx1P18111 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Cdx1P18111 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Cdx1P18111 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cdx1P18111 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.51□□□□□ -0.89
Cdx1P18111 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cdx1P18111 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.51□□□□□ -0.89
Cdx1P18111 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm13786-201ENSMUST00000122371 333 ntBASIC9.51□□□□□ -0.89
Cdx1P18111 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.51□□□□□ -0.89
Cdx1P18111 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Cdx1P18111 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.51□□□□□ -0.89
Cdx1P18111 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm38341-201ENSMUST00000195357 515 ntBASIC9.51□□□□□ -0.89
Cdx1P18111 Gm43758-201ENSMUST00000199500 367 ntBASIC9.51□□□□□ -0.89
Cdx1P18111 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.51□□□□□ -0.89
Cdx1P18111 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.51□□□□□ -0.89
Cdx1P18111 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.51□□□□□ -0.89
Cdx1P18111 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cdx1P18111 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.51□□□□□ -0.89
Cdx1P18111 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cdx1P18111 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms