Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Gm12247-201ENSMUST00000117585 670 ntBASIC8.97□□□□□ -0.97
Fn1P11276 Gm5638-201ENSMUST00000118618 1258 ntBASIC8.97□□□□□ -0.97
Fn1P11276 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC8.97□□□□□ -0.97
Fn1P11276 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC8.97□□□□□ -0.97
Fn1P11276 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Fn1P11276 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC8.97□□□□□ -0.97
Fn1P11276 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 AC137842.1-201ENSMUST00000227896 2064 ntBASIC8.97□□□□□ -0.97
Fn1P11276 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.97□□□□□ -0.97
Fn1P11276 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC8.97□□□□□ -0.97
Fn1P11276 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Fn1P11276 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Fn1P11276 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.97□□□□□ -0.97
Fn1P11276 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Adra1a-206ENSMUST00000225182 2337 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Gm23432-201ENSMUST00000157181 131 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Gm27316-201ENSMUST00000184884 277 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Gm5982-201ENSMUST00000196234 512 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Id2-203ENSMUST00000222667 958 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.96□□□□□ -0.97
Fn1P11276 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Fn1P11276 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC8.96□□□□□ -0.97
Fn1P11276 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Fn1P11276 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Fn1P11276 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.96□□□□□ -0.98
Fn1P11276 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Fn1P11276 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC8.96□□□□□ -0.98
Fn1P11276 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC8.96□□□□□ -0.98
Fn1P11276 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC8.96□□□□□ -0.98
Fn1P11276 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC8.96□□□□□ -0.98
Fn1P11276 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Gm5254-201ENSMUST00000188353 977 ntBASIC8.96□□□□□ -0.98
Fn1P11276 Gm40332-201ENSMUST00000199847 938 ntBASIC8.96□□□□□ -0.98
Fn1P11276 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC8.96□□□□□ -0.98
Fn1P11276 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Fn1P11276 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC8.96□□□□□ -0.98
Fn1P11276 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC8.96□□□□□ -0.98
Fn1P11276 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Fn1P11276 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Fn1P11276 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Fn1P11276 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms