Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm10434-201ENSMUST00000101158 471 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm6023-201ENSMUST00000118217 606 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm36991-201ENSMUST00000191800 648 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 AY702102-202ENSMUST00000194651 1173 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm5950-201ENSMUST00000213337 772 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm12742-201ENSMUST00000117326 410 ntBASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm38158-201ENSMUST00000194617 339 ntBASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh1F7BJK1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh1F7BJK1 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms