Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 n-R5s71-201ENSMUST00000093668 119 ntBASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hfm1D3Z4R1 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm42499-201ENSMUST00000196193 1412 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm24078-201ENSMUST00000158184 103 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm19246-201ENSMUST00000173599 255 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm27390-201ENSMUST00000184516 176 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm37207-201ENSMUST00000194284 296 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 AC122024.3-201ENSMUST00000217719 294 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm5053-201ENSMUST00000208361 1678 ntBASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hfm1D3Z4R1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gm14398-201ENSMUST00000117287 1073 ntBASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gm14113-201ENSMUST00000121399 976 ntBASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 AC154759.1-201ENSMUST00000224137 1159 ntBASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 CT025689.1-201ENSMUST00000225214 283 ntBASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gm42970-201ENSMUST00000196407 1352 ntBASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gm43242-201ENSMUST00000199507 1776 ntBASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hfm1D3Z4R1 AC022682.1-201ENSMUST00000224624 2023 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Gm13171-201ENSMUST00000117233 391 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Gm15982-201ENSMUST00000121681 554 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Gm6644-201ENSMUST00000186507 951 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 AC164556.1-201ENSMUST00000221318 751 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Rps3a2-201ENSMUST00000074245 792 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Rps3a3-201ENSMUST00000074680 795 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms