Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gm9132-201ENSMUST00000210182 832 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Gm37299-201ENSMUST00000193951 826 ntBASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Gm2875-201ENSMUST00000211333 360 ntBASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Btrc-209ENSMUST00000224478 2194 ntBASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn8aQ9WTU3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm8111-201ENSMUST00000117659 987 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm3329-201ENSMUST00000159873 556 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Mir7032-201ENSMUST00000185154 79 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm11949-201ENSMUST00000117640 372 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm11451-201ENSMUST00000118946 630 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm15617-201ENSMUST00000118973 771 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm13888-201ENSMUST00000119148 422 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Gm14942-201ENSMUST00000119642 336 ntBASIC11.74□□□□□ -0.53
Scn8aQ9WTU3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms